| Ilastik: interactive machine learning for (bio) image analysis S Berg, D Kutra, T Kroeger, CN Straehle, BX Kausler, C Haubold, ... Nature methods 16 (12), 1226-1232, 2019 | 1826 | 2019 |
| Accurate and Versatile 3D Segmentation of Plant Tissues at Cellular Resolution A Wolny, L Cerrone, A Vijayan, R Tofanelli, AV Barro, M Louveaux, ... eLife 9, e57613, 2020 | 206 | 2020 |
| A digital 3D reference atlas reveals cellular growth patterns shaping the Arabidopsis ovule A Vijayan, R Tofanelli, S Strauss, L Cerrone, A Wolny, J Strohmeier, ... eLife 10, e63262, 2021 | 59 | 2021 |
| Microscopy‐based assay for semi‐quantitative detection of SARS‐CoV‐2 specific antibodies in human sera: A semi‐quantitative, high throughput, microscopy‐based assay expands … C Pape, R Remme, A Wolny, S Olberg, S Wolf, L Cerrone, M Cortese, ... Bioessays 43 (3), 2000257, 2021 | 29 | 2021 |
| An ex vivo system to study cellular dynamics underlying mouse peri-implantation development T Ichikawa, HT Zhang, L Panavaite, A Erzberger, D Fabrèges, R Snajder, ... Developmental cell 57 (3), 373-386. e9, 2022 | 26 | 2022 |
| Leveraging domain knowledge to improve microscopy image segmentation with lifted multicuts C Pape, A Matskevych, A Wolny, J Hennies, G Mizzon, M Louveaux, ... Frontiers in Computer Science 1, 6, 2019 | 25 | 2019 |
| Sparse object-level supervision for instance segmentation with pixel embeddings A Wolny, Q Yu, C Pape, A Kreshuk Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2022 | 21 | 2022 |
| Integration of Cell Growth and Asymmetric Division during Lateral Root Initiation in Arabidopsis thaliana LM Schütz, M Louveaux, A Vilches Barro, S Bouziri, L Cerrone, A Wolny, ... Plant and Cell Physiology 62 (8), 1269-1279, 2021 | 17 | 2021 |
| Embryo‐uterine interaction coordinates mouse embryogenesis during implantation V Bondarenko, M Nikolaev, D Kromm, R Belousov, A Wolny, ... The EMBO Journal 42 (17), e113280, 2023 | 11 | 2023 |
| Query Generation for Social Media Data AS Wolny, JFW Dietz, RMF Rogers US Patent App. 15/602,161, 2018 | 8 | 2018 |
| Improving population-based algorithms with fitness deterioration A Wolny, R Schaefer Journal of Telecommunications and Information Technology, 31-44, 2011 | 8 | 2011 |
| From shallow to deep: exploiting feature-based classifiers for domain adaptation in semantic segmentation A Matskevych, A Wolny, C Pape, A Kreshuk Frontiers in Computer Science 4, 805166, 2022 | 6 | 2022 |
| Temporal variability and cell mechanics control robustness in mammalian embryogenesis D Fabrèges, BC Murtra, P Moghe, A Kickuth, T Ichikawa, C Iwatani, ... Biorxiv, 2023.01. 24.525420, 2023 | 4 | 2023 |
| A deep learning-based toolkit for 3D nuclei segmentation and quantitative analysis in cellular and tissue context A Vijayan, TA Mody, Q Yu, A Wolny, L Cerrone, S Strauss, M Tsiantis, ... Development 151 (14), 2024 | 3 | 2024 |
| Coordination between embryo growth and trophoblast migration upon implantation delineates mouse embryogenesis V Bondarenko, M Nikolaev, D Kromm, R Belousov, A Wolny, S Rezakhani, ... bioRxiv, 2022.06. 13.495767, 2022 | 3 | 2022 |
| Learning Instance Segmentation from Sparse Supervision A Wolny | | 2023 |
| A robust ex vivo system to study cellular dynamics underlying mouse peri-implantation development T Ichikawa, HT Zhang, L Panavaite, A Erzberger, D Fabrèges, R Snajder, ... bioRxiv, 2021.08. 22.457265, 2021 | | 2021 |
Anna KreshukGroup Leader, EMBL HeidelbergVerified email at embl.de
