Nigam Shah - Google Scholar

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	All	Since 2015
Citations	15148	9848
h-index	58	46
i10-index	148	124

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Mark MusenProfessor of Biomedical Informatics Research, Stanford UniversityVerified email at stanford.edu
Paea LePenduUniversity of California, RiversideVerified email at ucr.edu
Clement JonquetAssociate Professor of Informatics, University of MontpellierVerified email at lirmm.fr
Natasha NoyGoogle Inc.Verified email at acm.org
Srinivasan V IyerGraduate Student of Computer Science, University of WashingtonVerified email at cs.stanford.edu
Kenneth JungResearch Scientist, Stanford UniversityVerified email at stanford.edu
Trish WhetzelEMBL-EBIVerified email at ebi.ac.uk
Patrick RyanJanssen Research and DevelopmentVerified email at cornell.edu
Alison CallahanStanford UniversityVerified email at stanford.edu
Susanna-Assunta SansoneUniversity of Oxford, Oxford e-Research Centre (Associate Director, Associate Professor)Verified email at oerc.ox.ac.uk
George HripcsakColumbia UniversityVerified email at columbia.edu
Juan M. BandaGeorgia State UniversityVerified email at gsu.edu
Kevin T. NeadMD Anderson Cancer CenterVerified email at mdanderson.org
Philippe Rocca-SerraUniversity of OxfordVerified email at oerc.ox.ac.uk
Adrien CouletLORIA - INRIA Nancy-Grand Est & Stanford UniversityVerified email at loria.fr
Barry SmithProfessor of Philosophy, Biomedical Informatics, and Computer Science, University at BuffaloVerified email at buffalo.edu
Christopher G. ChuteBloomberg Distinguished Professor of Health Informatics, Johns HopkinsVerified email at jhu.edu
Christopher J MungallLawrence Berkeley National LaboratoryVerified email at lbl.gov
John P CookeChair, Department of Cardiovascular Sciences, Houston Methodist Research InstituteVerified email at houstonmethodist.org
Greg GaskinMedical Student, Stanford UniversityVerified email at stanford.edu

Nigam Shah

Associate Professor of Medicine, Stanford University

Verified email at stanford.edu - Homepage

ontology data mining medical informatics Biomedical Informatics


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The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration B Smith, M Ashburner, C Rosse, J Bard, W Bug, W Ceusters, LJ Goldberg, ... Nature biotechnology 25 (11), 1251-1255, 2007	2307	2007
BioPortal: ontologies and integrated data resources at the click of a mouse NF Noy, NH Shah, PL Whetzel, B Dai, M Dorf, N Griffith, C Jonquet, ... Nucleic acids research 37 (suppl 2), W170-W173, 2009	900	2009
BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications PL Whetzel, NF Noy, NH Shah, PR Alexander, C Nyulas, T Tudorache, ... Nucleic Acids Research 39 (suppl 2), W541, 2011	617	2011
The BioPAX community standard for pathway data sharing E Demir, MP Cary, S Paley, K Fukuda, C Lemer, I Vastrik, G Wu, ... Nature biotechnology 28 (9), 935-942, 2010	600	2010
Scalable and accurate deep learning with electronic health records A Rajkomar, E Oren, K Chen, AM Dai, N Hajaj, M Hardt, PJ Liu, X Liu, ... NPJ Digital Medicine 1 (1), 18, 2018	557	2018
Comparison of concept recognizers for building the Open Biomedical Annotator APCMAM Nigam H Shah, Nipun Bhatia, Clement Jonquet, Daniel Rubin BMC Bioinformatics 10 (S9), S14, 2009	456*	2009
Observational Health Data Sciences and Informatics (OHDSI): opportunities for observational researchers G Hripcsak, JD Duke, NH Shah, CG Reich, V Huser, MJ Schuemie, ... Studies in health technology and informatics 216, 574, 2015	362	2015
Biomedical ontologies: a functional perspective DL Rubin, NH Shah, NF Noy Briefings in bioinformatics 9 (1), 75-90, 2008	321	2008
Proton pump inhibitor usage and the risk of myocardial infarction in the general population NH Shah, P LePendu, A Bauer-Mehren, YT Ghebremariam, SV Iyer, ... PloS one 10 (6), e0124653, 2015	309	2015
Novel data‐mining methodologies for adverse drug event discovery and analysis R Harpaz, W DuMouchel, NH Shah, D Madigan, P Ryan, C Friedman Clinical Pharmacology & Therapeutics 91 (6), 1010-1021, 2012	304	2012
Implementing machine learning in health care—addressing ethical challenges DS Char, NH Shah, D Magnus The New England journal of medicine 378 (11), 981, 2018	250	2018
Characterizing the stress/defense transcriptome of Arabidopsis R Mahalingam, A Gomez-Buitrago, N Eckardt, N Shah, A Guevara-Garcia, ... Genome Biol 4 (3), R20, 2003	249	2003
Web-scale pharmacovigilance: listening to signals from the crowd RW White, NP Tatonetti, NH Shah, RB Altman, E Horvitz Journal of the American Medical Informatics Association 20 (3), 404-408, 2013	216	2013
The National Center for Biomedical Ontology MA Musen, NF Noy, NH Shah, CG Chute, MA Storey	214*	2005
Unexpected effect of proton pump inhibitors: elevation of the cardiovascular risk factor asymmetric dimethylarginine YT Ghebremariam, P LePendu, JC Lee, DA Erlanson, A Slaviero, ... Circulation 128 (8), 845-853, 2013	193	2013
Performance of pharmacovigilance signal‐detection algorithms for the FDA adverse event reporting system R Harpaz, W DuMouchel, P LePendu, A Bauer‐Mehren, P Ryan, ... Clinical Pharmacology & Therapeutics 93 (6), 539-546, 2013	189	2013
A nondegenerate code of deleterious variants in Mendelian loci contributes to complex disease risk DR Blair, CS Lyttle, JM Mortensen, CF Bearden, AB Jensen, ... Cell 155 (1), 70-80, 2013	182	2013
Text mining for adverse drug events: the promise, challenges, and state of the art R Harpaz, A Callahan, S Tamang, Y Low, D Odgers, S Finlayson, K Jung, ... Drug safety 37 (10), 777-790, 2014	174	2014
Improving palliative care with deep learning A Avati, K Jung, S Harman, L Downing, A Ng, NH Shah BMC medical informatics and decision making 18 (4), 122, 2018	167	2018
What this computer needs is a physician: humanism and artificial intelligence A Verghese, NH Shah, RA Harrington Jama 319 (1), 19-20, 2018	167	2018

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