Nigam Shah

Cited by

	All	Since 2015
Citations	16418	11095
h-index	59	49
i10-index	157	134

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200520062007200820092010201120122013201420152016201720182019202065 68 80 224 414 535 710 848 953 1170 1228 1442 1463 1762 2312 2777

Co-authors

Mark MusenProfessor of Biomedical Informatics Research, Stanford UniversityVerified email at stanford.edu
Paea LePenduUniversity of California, RiversideVerified email at ucr.edu
Clement JonquetAssociate Research Scientist – INRAE (MISTEA) & Associate Professor – Univ. of Montpellier (LIRMM)Verified email at lirmm.fr
Natasha NoyGoogle Inc.Verified email at acm.org
Srinivasan V IyerGraduate Student of Computer Science, University of WashingtonVerified email at cs.stanford.edu
Trish WhetzelEMBL-EBIVerified email at ebi.ac.uk
Alison CallahanStanford UniversityVerified email at stanford.edu
Patrick RyanJanssen Research and DevelopmentVerified email at cornell.edu
Susanna-Assunta SansoneUniversity of Oxford, Oxford e-Research Centre (Associate Director, Associate Professor)Verified email at oerc.ox.ac.uk
George HripcsakColumbia UniversityVerified email at columbia.edu
Juan M. BandaGeorgia State UniversityVerified email at gsu.edu
Kevin T. NeadMD Anderson Cancer CenterVerified email at mdanderson.org
Philippe Rocca-SerraUniversity of OxfordVerified email at oerc.ox.ac.uk
Adrien CouletInria Paris & Loria, NancyVerified email at inria.fr
Barry SmithProfessor of Philosophy, Biomedical Informatics, and Computer Science, University at BuffaloVerified email at buffalo.edu
Christopher J MungallLawrence Berkeley National LaboratoryVerified email at lbl.gov
Christopher G. ChuteBloomberg Distinguished Professor of Health Informatics, Johns HopkinsVerified email at jhu.edu
John P CookeChair, Department of Cardiovascular Sciences, Houston Methodist Research InstituteVerified email at houstonmethodist.org
Greg GaskinMedical Student, Stanford UniversityVerified email at stanford.edu
Martijn SchuemieJanssen R&DVerified email at ohdsi.org

Nigam Shah

Associate Professor of Medicine, Stanford University

Verified email at stanford.edu - Homepage

ontology data mining medical informatics Biomedical Informatics


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The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration B Smith, M Ashburner, C Rosse, J Bard, W Bug, W Ceusters, LJ Goldberg, ... Nature biotechnology 25 (11), 1251-1255, 2007	2389	2007
BioPortal: ontologies and integrated data resources at the click of a mouse NF Noy, NH Shah, PL Whetzel, B Dai, M Dorf, N Griffith, C Jonquet, ... Nucleic acids research 37 (suppl 2), W170-W173, 2009	919	2009
Scalable and accurate deep learning with electronic health records A Rajkomar, E Oren, K Chen, AM Dai, N Hajaj, M Hardt, PJ Liu, X Liu, ... NPJ Digital Medicine 1 (1), 18, 2018	693	2018
BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications PL Whetzel, NF Noy, NH Shah, PR Alexander, C Nyulas, T Tudorache, ... Nucleic Acids Research 39 (suppl 2), W541, 2011	645	2011
The BioPAX community standard for pathway data sharing E Demir, MP Cary, S Paley, K Fukuda, C Lemer, I Vastrik, G Wu, ... Nature biotechnology 28 (9), 935-942, 2010	619	2010
Comparison of concept recognizers for building the Open Biomedical Annotator APCMAM Nigam H Shah, Nipun Bhatia, Clement Jonquet, Daniel Rubin BMC Bioinformatics 10 (S9), S14, 2009	463*	2009
Observational Health Data Sciences and Informatics (OHDSI): opportunities for observational researchers G Hripcsak, JD Duke, NH Shah, CG Reich, V Huser, MJ Schuemie, ... Studies in health technology and informatics 216, 574, 2015	433	2015
Biomedical ontologies: a functional perspective DL Rubin, NH Shah, NF Noy Briefings in bioinformatics 9 (1), 75-90, 2008	329	2008
Proton pump inhibitor usage and the risk of myocardial infarction in the general population NH Shah, P LePendu, A Bauer-Mehren, YT Ghebremariam, SV Iyer, ... PloS one 10 (6), e0124653, 2015	322	2015
Implementing machine learning in health care—addressing ethical challenges DS Char, NH Shah, D Magnus The New England journal of medicine 378 (11), 981, 2018	317	2018
Novel data‐mining methodologies for adverse drug event discovery and analysis R Harpaz, W DuMouchel, NH Shah, D Madigan, P Ryan, C Friedman Clinical Pharmacology & Therapeutics 91 (6), 1010-1021, 2012	317	2012
Characterizing the stress/defense transcriptome of Arabidopsis R Mahalingam, A Gomez-Buitrago, N Eckardt, N Shah, A Guevara-Garcia, ... Genome Biol 4 (3), R20, 2003	251	2003
Rates of co-infection between SARS-CoV-2 and other respiratory pathogens D Kim, J Quinn, B Pinsky, NH Shah, I Brown Jama, 2020	231	2020
The National Center for Biomedical Ontology MA Musen, NF Noy, NH Shah, CG Chute, MA Storey	221*	2005
Web-scale pharmacovigilance: listening to signals from the crowd RW White, NP Tatonetti, NH Shah, RB Altman, E Horvitz Journal of the American Medical Informatics Association 20 (3), 404-408, 2013	220	2013
Performance of pharmacovigilance signal‐detection algorithms for the FDA adverse event reporting system R Harpaz, W DuMouchel, P LePendu, A Bauer‐Mehren, P Ryan, ... Clinical Pharmacology & Therapeutics 93 (6), 539-546, 2013	201	2013
Improving palliative care with deep learning A Avati, K Jung, S Harman, L Downing, A Ng, NH Shah BMC medical informatics and decision making 18 (4), 122, 2018	197	2018
Unexpected effect of proton pump inhibitors: elevation of the cardiovascular risk factor asymmetric dimethylarginine YT Ghebremariam, P LePendu, JC Lee, DA Erlanson, A Slaviero, ... Circulation 128 (8), 845-853, 2013	197	2013
A nondegenerate code of deleterious variants in Mendelian loci contributes to complex disease risk DR Blair, CS Lyttle, JM Mortensen, CF Bearden, AB Jensen, ... Cell 155 (1), 70-80, 2013	186	2013
What this computer needs is a physician: humanism and artificial intelligence A Verghese, NH Shah, RA Harrington Jama 319 (1), 19-20, 2018	184	2018

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