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Simon Kelow
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Function-guided protein design by deep manifold sampling
V Gligorijević, D Berenberg, S Ra, A Watkins, S Kelow, K Cho, R Bonneau
bioRxiv, 2021.12. 22.473759, 2021
362021
Enhancements to the Rosetta energy function enable improved identification of small molecules that inhibit protein-protein interactions
A Bazzoli, SP Kelow, J Karanicolas
PLoS One 10 (10), e0140359, 2015
312015
Hiding in plain sight: structure and sequence analysis reveals the importance of the antibody DE loop for antibody-antigen binding
SP Kelow, J Adolf-Bryfogle, RL Dunbrack
MAbs 12 (1), 1840005, 2020
242020
Mouse modeling and structural analysis of the p. G307S mutation in human cystathionine β-synthase (CBS) reveal effects on CBS activity but not stability
S Gupta, S Kelow, L Wang, MD Andrake, RL Dunbrack, WD Kruger
Journal of Biological Chemistry 293 (36), 13921-13931, 2018
122018
A penultimate classification of canonical antibody CDR conformations
S Kelow, B Faezov, Q Xu, M Parker, J Adolf-Bryfogle, RL Dunbrack Jr
bioRxiv, 2022.10. 12.511988, 2022
62022
Contribution of an unusual CDR2 element of a single domain antibody in ricin toxin binding affinity and neutralizing activity
MJ Rudolph, DJ Vance, S Kelow, SK Angalakurthi, S Nguyen, SA Davis, ...
Protein Engineering, Design and Selection 31 (7-8), 277-287, 2018
52018
Multi-segment preserving sampling for deep manifold sampler
D Berenberg, JH Lee, S Kelow, JW Park, A Watkins, V Gligorijević, ...
arXiv preprint arXiv:2205.04259, 2022
42022
Computational design of nanomolar-binding antibodies specific to multiple SARS-CoV-2 variants by engineering a specificity switch of antibody 80R using RosettaAntibodyDesign …
NE Hernandez, W Jankowski, R Frick, SP Kelow, JH Lubin, V Simhadri, ...
Heliyon 9 (4), 2023
32023
Candidate variants in DNA replication and repair genes in early-onset renal cell carcinoma patients referred for germline testing
EV Demidova, IG Serebriiskii, R Vlasenkova, S Kelow, MD Andrake, ...
BMC genomics 24 (1), 212, 2023
22023
Particular solution to a time-fractional heat equation
SP Kelow, KM Hayden
J. Undergrad. Res. Phys. 26, 2013
22013
Identifying regularization schemes that make feature attributions faithful
J Adebayo, S Stanton, S Kelow, MMR Bonneau, V Gligorijevic, K Cho, ...
NeurIPS 2023 Workshop on New Frontiers of AI for Drug Discovery and Development, 2023
2023
Corrigendum to “Computational design of nanomolar-binding antibodies specific to multiple SARS-CoV-2 variants by engineering a specificity switch of antibody 80R using …
NE Hernandez, W Jankowski, R Frick, SP Kelow, JH Lubin, V Simhadri, ...
Heliyon 9 (8), 2023
2023
Correction: Candidate variants in DNA replication and repair genes in early-onset renal cell carcinoma patients referred for germline testing
EV Demidova, IG Serebriiskii, R Vlasenkova, S Kelow, MD Andrake, ...
BMC genomics 24 (1), 388, 2023
2023
Signatures of defective DNA repair and replication in early-onset renal cancer patients referred for germline genetic testing
EV Demidova, IG Serebriiskii, R Vlasenkova, S Kelow, MD Andrake, ...
medRxiv, 2022.05. 23.22275227, 2022
2022
A New Definition and Classification of Antibody Complementarity Determining Regions: Unsupervised Learning of Protein Backbone Conformations Informs Antibody Structural …
SP Kelow
University of Pennsylvania, 2021
2021
Hiding in plain sight: structure and sequence analysis reveals the
SP Kelow, J Adolf-Bryfogle, RL Dunbrack Jr
Nucleic Acids Res 27, 209-212, 1999
1999
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