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Darya Yurevna Orlova
Darya Yurevna Orlova
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Title
Cited by
Cited by
Year
Earth mover’s distance (EMD): a true metric for comparing biomarker expression levels in cell populations
DY Orlova, N Zimmerman, S Meehan, C Meehan, J Waters, EEB Ghosn, ...
PloS one 11 (3), e0151859, 2016
982016
Structure and epigenetics of nucleoli in comparison with non-nucleolar compartments
E Bártová, AH Horáková, R Uhlířová, I Raška, G Galiová, D Orlova, ...
Journal of Histochemistry & Cytochemistry 58 (5), 391-403, 2010
932010
Acetylation‐dependent nuclear arrangement and recruitment of BMI1 protein to UV‐damaged chromatin
G Šustáčková, S Kozubek, L Stixová, S Legartová, P Matula, D Orlova, ...
Journal of cellular physiology 227 (5), 1838-1850, 2012
642012
Light scattering by neutrophils: model, simulation, and experiment
DY Orlova, MA Yurkin, AG Hoekstra, VP Maltsev
Journal of Biomedical Optics 13 (5), 054057-054057-7, 2008
412008
AutoGate: automating analysis of flow cytometry data
S Meehan, G Walther, W Moore, D Orlova, C Meehan, D Parks, E Ghosn, ...
Immunologic research 58, 218-223, 2014
282014
QFMatch: multidimensional flow and mass cytometry samples alignment
DY Orlova, S Meehan, D Parks, WA Moore, C Meehan, Q Zhao, ...
Scientific reports 8 (1), 3291, 2018
192018
Science not art: statistically sound methods for identifying subsets in multi-dimensional flow and mass cytometry data sets
DY Orlova, LA Herzenberg, G Walther
Nature Reviews Immunology 18 (1), 77-77, 2018
182018
Dynamic quantification of antigen molecules with flow cytometry
AE Moskalensky, AV Chernyshev, MA Yurkin, VM Nekrasov, ...
Journal of immunological methods 418, 66-74, 2015
172015
Arrangement of nuclear structures is not transmitted through mitosis but is identical in sister cells
DY Orlova, L Stixová, S Kozubek, HJ Gierman, G Šustáčková, ...
Journal of cellular biochemistry 113 (11), 3313-3329, 2012
152012
Transcriptional reprogramming of infiltrating neutrophils drives lung pathology in severe COVID-19 despite low viral load
DJ Eddins, J Yang, A Kosters, VD Giacalone, X Pechuan-Jorge, ...
Blood advances 7 (5), 778-799, 2023
132023
Distribution function approach to the study of the kinetics of IgM antibody binding to FcγRIIIb (CD16b) receptors on neutrophils by flow cytometry
DY Orlova, VI Borisov, VS Kozhevnikov, VP Maltsev, AV Chernyshev
Journal of theoretical biology 290, 1-6, 2011
132011
Automated subset identification and characterization pipeline for multidimensional flow and mass cytometry data clustering and visualization
S Meehan, GA Kolyagin, D Parks, J Youngyunpipatkul, LA Herzenberg, ...
Communications Biology 2 (1), 229, 2019
102019
A nonfitting method using a spatial sine window transform for inhomogeneous effective-diffusion measurements by FRAP
DY Orlova, E Bártová, VP Maltsev, S Kozubek, AV Chernyshev
Biophysical journal 100 (2), 507-516, 2011
92011
Systems and methods for cluster matching across samples and guided visualization of multidimensional cytometry data
DY Orlova, SW Meehan, WA Moore, G Walther, DR Parks, LA Herzenberg, ...
US Patent 10,685,045, 2020
62020
SPEX: A modular end-to-end analytics tool for spatially resolved omics of tissues
X Pechuan-Jorge, X Li, T Risom, A Zubkov, E Tabatsky, A Prilipko, X Ye, ...
bioRxiv, 2022.08. 22.504841, 2022
52022
Cluster processing and ranking methods including methods applicable to clusters developed through density based merging
SW Meehan, WA Moore, G Walther, D Orlova, CGW Meehan, DR Parks, ...
US Patent 10,503,756, 2019
52019
Pathogenic neutrophilia drives acute respiratory distress syndrome in severe COVID-19 patients
DJ Eddins, J Yang, A Kosters, VD Giacalone, X Pechuan, JD Chandler, ...
bioRxiv, 2021.06. 02.446468, 2021
32021
Surveillance of in situ tumor arrays reveals early environmental control of cancer immunity
G Ortiz-Muńoz, M Brown, CB Carbone, J Pechuan-Jorge, AT Ritter, ...
bioRxiv, 2021.05. 27.445482, 2021
32021
Nuclear apoptotic volume decrease in individual cells: Confocal microscopy imaging and kinetic modeling
IV Khalo, AI Konokhova, DY Orlova, KV Trusov, MA Yurkin, E Bartova, ...
Journal of Theoretical Biology 454, 60-69, 2018
32018
Automated tumor immunophenotyping and response to immunotherapy in non-small cell lung cancer using a spatial statistics approach.
D Orlova, X Li, J Eastham-Anderson, W Zou, E Tabatsky, JM Giltnane, ...
Journal of Clinical Oncology 40 (16_suppl), 2626-2626, 2022
12022
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