Peer: a comprehensive and multi-task benchmark for protein sequence understanding M Xu, Z Zhang, J Lu, Z Zhu, Y Zhang, M Chang, R Liu, J Tang Advances in Neural Information Processing Systems 35, 35156-35173, 2022 | 93 | 2022 |
Torchdrug: A powerful and flexible machine learning platform for drug discovery Z Zhu, C Shi, Z Zhang, S Liu, M Xu, X Yuan, Y Zhang, J Chen, H Cai, J Lu, ... arXiv preprint arXiv:2202.08320, 2022 | 83 | 2022 |
E3bind: An end-to-end equivariant network for protein-ligand docking Y Zhang, H Cai, C Shi, B Zhong, J Tang International Conference on Learning Representations (ICLR 2023), 2022 | 37 | 2022 |
DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing Y Zhang, Z Zhang, B Zhong, S Misra, J Tang Advances in Neural Information Processing Systems 37 (NeurIPS 2023), 2023 | 31 | 2023 |
CaLMFlow: Volterra Flow Matching using Causal Language Models S He, D Levine, I Vrkic, MF Bressana, D Zhang, SA Rizvi, Y Zhang, ... arXiv preprint arXiv:2410.05292, 2024 | | 2024 |
A Survey on Diffusion Models for Recommender Systems J Lin, J Liu, J Zhu, Y Xi, C Liu, Y Zhang, Y Yu, W Zhang arXiv preprint arXiv:2409.05033, 2024 | | 2024 |