Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction S Knyazev, V Tsyvina, A Shankar, A Melnyk, A Artyomenko, T Malygina, ... Nucleic acids research 49 (17), e102-e102, 2021 | 46 | 2021 |
CliqueSNV: Scalable Reconstruction of Intra-Host Viral Populations from NGS Reads S Knyazev, V Tsyvina, A Melnyk, A Artyomenko, T Malygina, YB Porozov, ... bioRxiv, 264242, 2018 | 25 | 2018 |
Inference of clonal selection in cancer populations using single-cell sequencing data P Skums, V Tsyvina, A Zelikovsky Bioinformatics 35 (14), i398-i407, 2019 | 16 | 2019 |
CliqueSNV: An Efficient Noise Reduction Technique for Accurate Assembly of Viral Variants from NGS Data S Knyazev, V Tsyvina, A Shankar, A Melnyk, A Artyomenko, T Malygina, ... bioRxiv, 264242, 2020 | 12 | 2020 |
Inference of mutability landscapes of tumors from single cell sequencing data V Tsyvina, A Zelikovsky, S Snir, P Skums PLOS Computational Biology 16 (11), e1008454, 2020 | 7 | 2020 |
Delineating surface epitopes of Lyme disease pathogen targeted by highly protective antibodies of New Zealand White rabbits AS Rogovskyy, SEC Caoili, Y Ionov, H Piontkivska, P Skums, V Tsyvina, ... Infection and immunity 87 (8), 10.1128/iai. 00246-19, 2019 | 7 | 2019 |
Fast estimation of genetic relatedness between members of heterogeneous populations of closely related genomic variants V Tsyvina, DS Campo, S Sims, A Zelikovsky, Y Khudyakov, P Skums BMC bioinformatics 19, 1-10, 2018 | 6 | 2018 |
CliqueSNV: scalable reconstruction of intra‐host viral populations from NGS reads. bioRxiv 2018; 1‐8 S Knyazev, V Tsyvina, A Melnyk, T Malygina, YB Porozov, E Campbell | 5 | |
Algorithms for Analysis of Heterogeneous Cancer and Viral Populations Using High-Throughput Sequencing Data V Tsyvina | | 2021 |
Efficient filtering algorithm for detection of genetic similarity between large genomic datasets V Tsyvina, D Campo, S Sims, A Zelikovsky, Y Khudyakov, P Skums 2017 IEEE 7th International Conference on Computational Advances in Bio and …, 2017 | | 2017 |