| Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ... Applied and environmental microbiology 75 (23), 7537-7541, 2009 | 18495 | 2009 |
| Origins of the E. coli strain causing an outbreak of hemolytic–uremic syndrome in Germany DA Rasko, DR Webster, JW Sahl, A Bashir, N Boisen, F Scheutz, ... New England Journal of Medicine 365 (8), 709-717, 2011 | 1019 | 2011 |
| Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis DM Wagner, J Klunk, M Harbeck, A Devault, N Waglechner, JW Sahl, ... The Lancet infectious diseases 14 (4), 319-326, 2014 | 495 | 2014 |
| The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes J Sahl, JG Caporaso, D Rasko, P Keim PeerJ 2 (e332), 2014 | 233 | 2014 |
| 17th century variola virus reveals the recent history of smallpox AT Duggan, MF Perdomo, D Piombino-Mascali, S Marciniak, D Poinar, ... Current Biology 26 (24), 3407-3412, 2016 | 197 | 2016 |
| NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats JW Sahl, D Lemmer, J Travis, JM Schupp, JD Gillece, M Aziz, EM Driebe, ... Microbial genomics 2 (8), 2016 | 185 | 2016 |
| Best practices for evaluating single nucleotide variant calling methods for microbial genomics ND Olson, SP Lund, RE Colman, JT Foster, JW Sahl, JM Schupp, P Keim, ... Frontiers in genetics 6, 235, 2015 | 185 | 2015 |
| Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus KI Bos, A Herbig, J Sahl, N Waglechner, M Fourment, SA Forrest, J Klunk, ... Elife 5, e12994, 2016 | 178 | 2016 |
| A Comparative Genomic Analysis of Diverse Clonal Types of Enterotoxigenic Escherichia coli Reveals Pathovar-Specific Conservation JW Sahl, H Steinsland, JC Redman, SV Angiuoli, JP Nataro, ... Infection and immunity 79 (2), 950-960, 2011 | 148 | 2011 |
| Subsurface microbial diversity in deep-granitic-fracture water in Colorado JW Sahl, R Schmidt, ED Swanner, KW Mandernack, AS Templeton, ... Applied and Environmental Microbiology 74 (1), 143-152, 2008 | 140 | 2008 |
| Chemical sensing in mammalian host–bacterial commensal associations DT Hughes, DA Terekhova, L Liou, CJ Hovde, JW Sahl, AV Patankar, ... Proceedings of the National Academy of Sciences 107 (21), 9831-9836, 2010 | 135 | 2010 |
| Evolution of a pathogen: a comparative genomics analysis identifies a genetic pathway to pathogenesis in Acinetobacter JW Sahl, JD Gillece, JM Schupp, VG Waddell, EM Driebe, DM Engelthaler, ... PloS one 8 (1), e54287, 2013 | 125 | 2013 |
| Refining the pathovar paradigm via phylogenomics of the attaching and effacing Escherichia coli TH Hazen, JW Sahl, CM Fraser, MS Donnenberg, F Scheutz, DA Rasko Proceedings of the National Academy of Sciences 110 (31), 12810-12815, 2013 | 120 | 2013 |
| Comparative Genomics and stx Phage Characterization of LEE-Negative Shiga Toxin-Producing Escherichia coli SR Steyert, JW Sahl, CM Fraser, LD Teel, F Scheutz, DA Rasko Frontiers in cellular and infection microbiology 2, 133, 2012 | 102 | 2012 |
| Defining the phylogenomics of Shigella species: a pathway to diagnostics JW Sahl, CR Morris, J Emberger, CM Fraser, JB Ochieng, J Juma, ... Journal of clinical microbiology 53 (3), 951-960, 2015 | 84 | 2015 |
| Comparison of normalization methods for construction of large, multiplex amplicon pools for next-generation sequencing JK Harris, JW Sahl, TA Castoe, BD Wagner, DD Pollock, JR Spear Applied and environmental microbiology 76 (12), 3863-3868, 2010 | 83 | 2010 |
| Genomic comparison of multi-drug resistant invasive and colonizing Acinetobacter baumannii isolated from diverse human body sites reveals genomic plasticity JW Sahl, JK Johnson, AD Harris, AM Phillippy, WW Hsiao, KA Thom, ... BMC genomics 12 (1), 1-12, 2011 | 77 | 2011 |
| Transcriptional modulation of enterotoxigenic Escherichia coli virulence genes in response to epithelial cell interactions R Kansal, DA Rasko, JW Sahl, GP Munson, K Roy, Q Luo, A Sheikh, ... Infection and immunity 81 (1), 259-270, 2013 | 75 | 2013 |
| Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia CHD Williamson, JW Sahl, TJ Smith, G Xie, BT Foley, LA Smith, ... BMC genomics 17 (1), 1-20, 2016 | 74 | 2016 |
| Introducing mothur: Opensource, platform-independent, community supported software for describing and comparing microbial communities PD Schlosset, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ... Appl Environ Microbiol 75 (23), 7537-7541, 2009 | 70 | 2009 |
Paul KeimRegents Professor, Northern Arizona University, TGen, Executive Director of Pathogen and McrobiomeVerified email at nau.edu
