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Duncan Penfold-Brown
Duncan Penfold-Brown
Data Science, Machine Learning, Data Engineering, Software Development
Verified email at nyu.edu
Title
Cited by
Cited by
Year
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts
AG Baltz, M Munschauer, B Schwanhšusser, A Vasile, Y Murakawa, ...
Molecular cell 46 (5), 674-690, 2012
13282012
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17, 1-19, 2016
4162016
Cloud Scheduler: a resource manager for distributed compute clouds
P Armstrong, A Agarwal, A Bishop, A Charbonneau, R Desmarais, ...
arXiv preprint arXiv:1007.0050, 2010
532010
Parametric Bayesian priors and better choice of negative examples improve protein function prediction
N Youngs, D Penfold-Brown, K Drew, D Shasha, R Bonneau
Bioinformatics 29 (9), 1190-1198, 2013
472013
Negative example selection for protein function prediction: the NoGO database
N Youngs, D Penfold-Brown, R Bonneau, D Shasha
PLoS computational biology 10 (6), e1003644, 2014
452014
Big data, social media, and protest
JA Tucker, J Nagler, M MacDuffee, PB Metzger, D Penfold-Brown, ...
Computational social science 199, 2016
422016
Protest in the age of social media: Technology and Ukraine’s# EuroMaidan
J Tucker, M Metzger, D Penfold-Brown, R Bonneau, J Jost, J Nagler
332014
Digital dissent: An analysis of the motivational contents of tweets from an Occupy Wall Street demonstration.
M Langer, JT Jost, R Bonneau, MMD Metzger, S Noorbaloochi, ...
Motivation Science 5 (1), 14, 2019
202019
CANFAR: the Canadian advanced network for astronomical research
S Gaudet, N Hill, P Armstrong, N Ball, J Burke, B Chapel, E Chapin, ...
Software and Cyberinfrastructure for Astronomy 7740, 577-586, 2010
182010
The plant proteome folding project: structure and positive selection in plant protein families
MM Pentony, P Winters, D Penfold-Brown, K Drew, A Narechania, ...
Genome biology and evolution 4 (3), 360-371, 2012
172012
Deploying hep applications using xen and globus virtual workspaces
A Agarwal, R Desmarais, I Gable, D Grundy, D P-Brown, R Seuster, ...
Journal of Physics: Conference Series 119 (6), 062002, 2008
162008
Research computing in a distributed cloud environment
K Fransham, A Agarwal, P Armstrong, A Bishop, A Charbonneau, ...
Journal of Physics: Conference Series 256 (1), 012003, 2010
132010
A batch system for HEP applications on a distributed IaaS cloud
I Gable, A Agarwal, M Anderson, P Armstrong, K Fransham, ...
Journal of Physics: Conference Series 331 (6), 062010, 2011
102011
Dynamics of influence in online protest networks: Evidence from the 2013 Turkish protests
M Metzger, D Penfold-Brown, P BarberŠ, R Bonneau, J Jost, J Nagler, ...
APSA Annual Meeting, Washington, DC, 2014
92014
Simulation and user analysis of BaBar data in a distributed cloud
A Agarwal, M Anderson, P Armstrong, A Charbonneau, K Fransham, ...
PoS, ISGC, 2011
32011
Data intensive high energy physics analysis in a distributed cloud
RJ Sobie, A Agarwal, M Anderson, P Armstrong, K Fransham, I Gable, ...
arXiv preprint arXiv:1101.0357, 2011
32011
Predicting legislators’ votes on the government shutdown using Twitter
I Cioroianu, J Nagler, J Tucker, D Penfold-Brown, J Ronen, P BarberŠ, ...
NYU Social Media and Political Participation (SMaPP) Lab, 1800
1800
Motivation Science
M Langer, JT Jost, R Bonneau, MMD Metzger, S Noorbaloochi, ...
Online Appendix for: Big Data, Social Media, and Protest: Foundations for a Research Agenda
J Tucker, J Nagler, M Metzger, P BarberŠ, D Penfold-Brown, J Jost, ...
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