Aerobic glycolysis promotes T helper 1 cell differentiation through an epigenetic mechanism M Peng, N Yin, S Chhangawala, K Xu, CS Leslie, MO Li Science 354 (6311), 481-484, 2016 | 610 | 2016 |
Cancer immunosurveillance by tissue-resident innate lymphoid cells and innate-like T cells S Dadi, S Chhangawala, BM Whitlock, RA Franklin, CT Luo, SA Oh, ... Cell 164 (3), 365-377, 2016 | 325 | 2016 |
Geospatial resolution of human and bacterial diversity with city-scale metagenomics E Afshinnekoo, C Meydan, S Chowdhury, D Jaroudi, C Boyer, N Bernstein, ... Cell systems 1 (1), 72-87, 2015 | 322 | 2015 |
Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study S Li, SW Tighe, CM Nicolet, D Grove, S Levy, W Farmerie, A Viale, ... Nature biotechnology 32 (9), 915-925, 2014 | 231 | 2014 |
GuideScan software for improved single and paired CRISPR guide RNA design AR Perez, Y Pritykin, JA Vidigal, S Chhangawala, L Zamparo, CS Leslie, ... Nature biotechnology 35 (4), 347-349, 2017 | 213 | 2017 |
SPOP mutation leads to genomic instability in prostate cancer G Boysen, CE Barbieri, D Prandi, M Blattner, SS Chae, A Dahija, ... Elife 4, e09207, 2015 | 185 | 2015 |
Yap reprograms glutamine metabolism to increase nucleotide biosynthesis and enable liver growth AG Cox, KL Hwang, KK Brown, KJ Evason, S Beltz, A Tsomides, ... Nature cell biology 18 (8), 886-896, 2016 | 178 | 2016 |
Defining HLA-II Ligand Processing and Binding Rules with Mass Spectrometry Enhances Cancer Epitope Prediction JG Abelin, D Harjanto, M Malloy, P Suri, T Colson, SP Goulding, ... Immunity 51 (4), 766-779. e17, 2019 | 176 | 2019 |
FOXA1 mutations alter pioneering activity, differentiation and prostate cancer phenotypes EJ Adams, WR Karthaus, E Hoover, D Liu, A Gruet, Z Zhang, H Cho, ... Nature 571 (7765), 408-412, 2019 | 163 | 2019 |
The impact of read length on quantification of differentially expressed genes and splice junction detection S Chhangawala, G Rudy, CE Mason, JA Rosenfeld Genome biology 16 (1), 1-10, 2015 | 161 | 2015 |
ARID1A determines luminal identity and therapeutic response in estrogen-receptor-positive breast cancer G Xu, S Chhangawala, E Cocco, P Razavi, Y Cai, JE Otto, L Ferrando, ... Nature genetics 52 (2), 198-207, 2020 | 128 | 2020 |
Functional screen of MSI2 interactors identifies an essential role for SYNCRIP in myeloid leukemia stem cells LP Vu, C Prieto, EM Amin, S Chhangawala, A Krivtsov, MN Calvo-Vidal, ... Nature genetics 49 (6), 866-875, 2017 | 81 | 2017 |
IKZF2 drives leukemia stem cell self-renewal and inhibits myeloid differentiation SM Park, H Cho, AM Thornton, TS Barlowe, T Chou, S Chhangawala, ... Cell stem cell 24 (1), 153-165. e7, 2019 | 65 | 2019 |
Selenoprotein H is an essential regulator of redox homeostasis that cooperates with p53 in development and tumorigenesis AG Cox, A Tsomides, AJ Kim, D Saunders, KL Hwang, KJ Evason, ... Proceedings of the National Academy of Sciences 113 (38), E5562-E5571, 2016 | 59 | 2016 |
Oncogenic BRAF disrupts thyroid morphogenesis and function via twist expression V Anelli, JA Villefranc, S Chhangawala, R Martinez-McFaline, E Riva, ... Elife 6, e20728, 2017 | 54 | 2017 |
Ligand-activated BMP signaling inhibits cell differentiation and death to promote melanoma AM Venkatesan, R Vyas, AK Gramann, K Dresser, S Gujja, S Bhatnagar, ... The Journal of clinical investigation 128 (1), 294-308, 2018 | 52 | 2018 |
RSK1 activation promotes invasion in nodular melanoma A Salhi, JA Farhadian, KM Giles, EVS de Miera, IP Silva, C Bourque, ... The American journal of pathology 185 (3), 704-716, 2015 | 32 | 2015 |
Pancreatic cancer prognosis is predicted by an ATAC-array technology for assessing chromatin accessibility S Dhara, S Chhangawala, H Chintalapudi, G Askan, V Aveson, AL Massa, ... Nature communications 12 (1), 1-9, 2021 | 21 | 2021 |
Multi-platform and cross-methodological reproducibility of transcriptome profiling by RNA-seq in the ABRF Next-Generation Sequencing Study S Li, SW Tighe, CM Nicolet, D Grove, S Levy, W Farmerie, A Viale, ... Nature biotechnology 32 (9), 915, 2014 | 8 | 2014 |
Defining HLA-II ligand processing and binding rules with mass spectrometry enhances cancer epitope prediction JG Abelin, D Harjanto, M Malloy, P Suri, T Colson, SP Goulding, ... Immunity 54 (2), 388, 2021 | 5 | 2021 |