Sibelia: a scalable and comprehensive synteny block generation tool for closely related microbial genomes I Minkin, A Patel, M Kolmogorov, N Vyahhi, S Pham Algorithms in Bioinformatics: 13th International Workshop, WABI 2013, Sophia …, 2013 | 112 | 2013 |
TwoPaCo: an efficient algorithm to build the compacted de Bruijn graph from many complete genomes I Minkin, S Pham, P Medvedev Bioinformatics 33 (24), 4024-4032, 2017 | 79 | 2017 |
Scalable multiple whole-genome alignment and locally collinear block construction with SibeliaZ I Minkin, P Medvedev Nature communications 11 (1), 6327, 2020 | 49 | 2020 |
C-Sibelia: an easy-to-use and highly accurate tool for bacterial genome comparison I Minkin, H Pham, E Starostina, N Vyahhi, S Pham F1000Research 2, 2013 | 24 | 2013 |
A strategy for building and using a human reference pangenome B Llamas, G Narzisi, V Schneider, PA Audano, E Biederstedt, L Blauvelt, ... F1000Research 8 (1751), 1751, 2021 | 13 | 2021 |
Scalable pairwise whole-genome homology mapping of long genomes with BubbZ I Minkin, P Medvedev IScience 23 (6), 101224, 2020 | 6 | 2020 |
Lecture notes in computer science I Minkin, A Patel, M Kolmogorov, N Vyahhi, S Pham LNBI, Springer, Berlin 8126, 215-229, 2013 | 5 | 2013 |
A Strategy for Building and Using a Human Reference Pangenome [Version 2; Peer Review: 2 approved] B Llamas, G Narzisi, V Schneider, PA Audano, E Biederstedt, L Blauvelt, ... F1000Research 8, 2021 | | 2021 |
Applications of the Compacted de Bruijn Graph in Comparative Genomics I Minkin The Pennsylvania State University, 2020 | | 2020 |
genome comparison [version 1; referees: 2 approved] I Minkin, H Pham, E Starostina, N Vyahhi, S Pham | | 2013 |
A strategy for building and using a human reference pangenome [version 1; peer review: awaiting peer review] B Llamas, G Narzisi, V Schneider, PA Audano, E Biederstedt, L Blauvelt, ... | | |