Ilia Minkin
Ilia Minkin
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Sibelia: a scalable and comprehensive synteny block generation tool for closely related microbial genomes
I Minkin, A Patel, M Kolmogorov, N Vyahhi, S Pham
International Workshop on Algorithms in Bioinformatics, 215-229, 2013
TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes
I Minkin, S Pham, P Medvedev
Bioinformatics 33 (24), 4024-4032, 2017
C-Sibelia: an easy-to-use and highly accurate tool for bacterial genome comparison
I Minkin, H Pham, E Starostina, N Vyahhi, S Pham
F1000Research 2, 2013
Scalable multiple whole-genome alignment and locally collinear block construction with SibeliaZ
I Minkin, P Medvedev
Nature communications 11 (1), 1-11, 2020
A strategy for building and using a human reference pangenome
B Llamas, G Narzisi, V Schneider, PA Audano, E Biederstedt, L Blauvelt, ...
F1000Research 8 (1751), 1751, 2019
Scalable pairwise whole-genome homology mapping of long genomes with BubbZ
I Minkin, P Medvedev
IScience 23 (6), 101224, 2020
Applications of the compacted de bruijn graph in Comparative genomics
I Minkin
genome comparison [version 1; referees: 2 approved]
I Minkin, H Pham, E Starostina, N Vyahhi, S Pham
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