|A mammalian microRNA expression atlas based on small RNA library sequencing|
P Landgraf, M Rusu, R Sheridan, A Sewer, N Iovino, A Aravin, S Pfeffer, ...
Cell 129 (7), 1401-1414, 2007
|A deep learning-based algorithm for 2-D cell segmentation in microscopy images|
Y Al-Kofahi, A Zaltsman, R Graves, W Marshall, M Rusu
BMC bioinformatics 19 (1), 1-11, 2018
|Radiomics analysis on FLT-PET/MRI for characterization of early treatment response in renal cell carcinoma: a proof-of-concept study|
J Antunes, S Viswanath, M Rusu, L Valls, C Hoimes, N Avril, ...
Translational oncology 9 (2), 155-162, 2016
|Using Sculptor and Situs for simultaneous assembly of atomic components into low-resolution shapes|
S Birmanns, M Rusu, W Wriggers
Journal of structural biology 173 (3), 428-435, 2011
|Evolutionary bidirectional expansion for the tracing of alpha helices in cryo-electron microscopy reconstructions|
M Rusu, W Wriggers
Journal of structural biology 177 (2), 410-419, 2012
|Automated tracing of filaments in 3D electron tomography reconstructions using Sculptor and Situs|
M Rusu, Z Starosolski, M Wahle, A Rigort, W Wriggers
Journal of structural biology 178 (2), 121-128, 2012
|Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning|
A Hering, L Hansen, TCW Mok, ACS Chung, H Siebert, S Häger, A Lange, ...
IEEE Transactions on Medical Imaging, 2022
|An assembly model of Rift Valley fever virus|
M Rusu, R Bonneau, MR Holbrook, SJ Watowich, S Birmanns, ...
Frontiers in microbiology 3, 254, 2012
|Identifying in vivo DCE MRI markers associated with microvessel architecture and gleason grades of prostate cancer|
A Singanamalli, M Rusu, RE Sparks, NNC Shih, A Ziober, LP Wang, ...
Journal of Magnetic Resonance Imaging 43 (1), 149-158, 2016
|ProsRegNet: A deep learning framework for registration of MRI and histopathology images of the prostate|
W Shao, L Banh, CA Kunder, RE Fan, SJC Soerensen, JB Wang, ...
Medical image analysis 68, 101919, 2021
|Biomolecular pleiomorphism probed by spatial interpolation of coarse models|
M Rusu, S Birmanns, W Wriggers
Bioinformatics 24 (21), 2460-2466, 2008
|Co-Registration of ex vivo Surgical Histopathology and in vivo T2 weighted MRI of the Prostate via multi-scale spectral embedding representation|
L Li, S Pahwa, G Penzias, M Rusu, J Gollamudi, S Viswanath, ...
Scientific reports 7 (1), 8717, 2017
|Identifying quantitative in vivo multi-parametric MRI features for treatment related changes after laser interstitial thermal therapy of prostate cancer|
S Viswanath, R Toth, M Rusu, D Sperling, H Lepor, J Futterer, ...
Neurocomputing 144, 13-23, 2014
|Registration of presurgical MRI and histopathology images from radical prostatectomy via RAPSODI|
M Rusu, W Shao, CA Kunder, JB Wang, SJC Soerensen, NC Teslovich, ...
Medical physics 47 (9), 4177-4188, 2020
|Multiscale, multimodal analysis of tumor heterogeneity in IDH1 mutant vs wild-type diffuse gliomas|
ME Berens, A Sood, JS Barnholtz-Sloan, JF Graf, S Cho, S Kim, J Kiefer, ...
PLoS One 14 (12), e0219724, 2019
|An application of generative adversarial networks for super resolution medical imaging|
R Sood, B Topiwala, K Choutagunta, R Sood, M Rusu
2018 17th IEEE International Conference on Machine Learning and Applications …, 2018
|3D registration of pre-surgical prostate MRI and histopathology images via super-resolution volume reconstruction|
RR Sood, W Shao, C Kunder, NC Teslovich, JB Wang, SJC Soerensen, ...
Medical image analysis 69, 101957, 2021
|Automated detection of aggressive and indolent prostate cancer on magnetic resonance imaging|
A Seetharaman, I Bhattacharya, LC Chen, CA Kunder, W Shao, ...
Medical Physics 48 (6), 2960-2972, 2021
|Decision support for disease characterization and treatment response with disease and peri-disease radiomics|
A Madabhushi, M Orooji, M Rusu, P Linden, R Gilkeson, NM Braman
US Patent 10,004,471, 2018
|Co-registration of pre-operative CT with ex vivo surgically excised ground glass nodules to define spatial extent of invasive adenocarcinoma on in vivo imaging: a proof-of …|
M Rusu, P Rajiah, R Gilkeson, M Yang, C Donatelli, R Thawani, ...
European radiology 27, 4209-4217, 2017