| Genome rearrangements and selection in multi-chromosome bacteria Burkholderia spp. OO Bochkareva, EV Moroz, II Davydov, MS Gelfand BMC Genomics 19 (1), 965, 2018 | 38 | 2018 |
| Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction OM Sigalova, AV Chaplin, OO Bochkareva, PV Shelyakin, VA Filaretov, ... Bmc Genomics 20, 1-17, 2019 | 32 | 2019 |
| Micro-evolution of three Streptococcus species: selection, antigenic variation, and horizontal gene inflow PV Shelyakin, OO Bochkareva, AA Karan, MS Gelfand BMC Evolutionary Biology 19 (1), 83, 2019 | 27 | 2019 |
| High Rates of Genome Rearrangements and Pathogenicity of Shigella spp. Z Seferbekova, A Zabelkin, Y Yakovleva, R Afasizhev, NO Dranenko, ... Frontiers in microbiology 12, 628622, 2021 | 22 | 2021 |
| Atypical enteropathogenic E. coli are associated with disease activity in ulcerative colitis M Baumgartner, R Zirnbauer, S Schlager, D Mertens, N Gasche, B Sladek, ... Gut Microbes 14 (1), 2143218, 2022 | 15 | 2022 |
| Genome rearrangements and phylogeny reconstruction in Yersinia pestis OO Bochkareva, NO Dranenko, ES Ocheredko, GM Kanevsky, ... PeerJ 6, e4545, 2018 | 15 | 2018 |
| Machine learning and phylogenetic analysis allow for predicting antibiotic resistance in M. tuberculosis A Yurtseven, S Buyanova, AA Agrawal, OO Bochkareva, OV Kalinina BMC microbiology 23 (1), 404, 2023 | 6 | 2023 |
| Chromosome-encoded IpaH ubiquitin ligases indicate non-human enteroinvasive Escherichia NO Dranenko, MN Tutukina, MS Gelfand, FA Kondrashov, ... Scientific Reports 12 (1), 1-10, 2022 | 6 | 2022 |
| Characterization of Methanosarcina mazei JL01 isolated from Holocene Arctic Permafrost and study of the archaeon cooperation with bacterium Sphaerochaeta associata GLS2T V Oshurkova, O Troshina, V Trubitsyn, Y Ryzhmanova, O Bochkareva, ... Proceedings 66 (1), 4, 2020 | 5 | 2020 |
| PaReBrick: PArallel REarrangements and BReaks identification toolkit A Zabelkin, Y Yakovleva, O Bochkareva, N Alexeev Bioinformatics 38 (2), 357-363, 2022 | 4 | 2022 |
| Pulsatile basal gene expression as a fitness determinant in bacteria K Jain, R Hauschild, OO Bochkareva, R Roemhild, G Tkacik, CC Guet bioRxiv, 2024.09. 30.615870, 2024 | | 2024 |
| Genome rearrangements drive evolution of ANK genes in Wolbachia EV Vostokova, NO Dranenko, MS Gelfand, OO Bochkareva bioRxiv, 2023.10. 25.563763, 2023 | | 2023 |
| Evolutionary trajectories of secondary replicons in multipartite genomes NO Dranenko, AD Rodina, YV Demenchuk, MS Gelfand, OO Bochkareva bioRxiv, 2023.04. 09.536151, 2023 | | 2023 |
| Patterns of multiple replicons' sizes in bacteria NO Dranenko, A Rodina, Y Demenchuk, MS Gelfand, OO Bochkareva ИТиС 2022, 19-21, 2022 | | 2022 |
| Evolutionary benefits of bacterial genomes with chromids OOB Kristina Y. Perevoshchikova , Vera Emelianenko , Mikhail S. Gelfand ... Moscow Conference on Computational Molecular Biology (MCCMB 2021), 2021 | | 2021 |
| Insertion sequences in B. mallei: adaptation to intracellular lifestyle AA Semenova, OO Bochkareva Moscow Conference on Computational Molecular Biology (MCCMB 2021), 2021 | | 2021 |
| The Classification of ipaH Genes in Shigella and Enteroinvasive Escherichia N Dranenko, M Tutukina, O Bochkareva Moscow Conference on Computational Molecular Biology (MCCMB 2021), 2021 | | 2021 |
| Two sequence variants of the yjjM gene in the Escherichia coli genomes V Emelianenko, A Kaznadzey, M Tutukina, O Bochkareva Moscow Conference on Computational Molecular Biology (MCCMB 2021), 2021 | | 2021 |
| Method for detection of parallel adaptation with genome rearrangements in bacterial populations A Zabelkin, Y Yakovleva, O Bochkareva, N Alexeev Moscow Conference on Computational Molecular Biology (MCCMB 2021), 2021 | | 2021 |
| Additional file 10 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction OM Sigalova, AV Chaplin, O Bochkareva, PV Shelyakin, VA Filaretov, ... | | 2019 |
Mikhail GelfandVice-President for Biomedical Research, SkoltechVerified email at skoltech.ru
