A compendium of RNA-binding motifs for decoding gene regulation D Ray, H Kazan, KB Cook, MT Weirauch, HS Najafabadi, X Li, ... Nature 499 (7457), 172-177, 2013 | 1550 | 2013 |
RBPDB: a database of RNA-binding specificities KB Cook, H Kazan, K Zuberi, Q Morris, TR Hughes Nucleic acids research 39 (suppl_1), D301-D308, 2010 | 609 | 2010 |
Rapid and systematic analysis of the RNA recognition specificities of RNA-binding proteins D Ray, H Kazan, ET Chan, LP Castillo, S Chaudhry, S Talukder, ... Nature biotechnology 27 (7), 667-670, 2009 | 543 | 2009 |
LIN28 binds messenger RNAs at GGAGA motifs and regulates splicing factor abundance ML Wilbert, SC Huelga, K Kapeli, TJ Stark, TY Liang, SX Chen, BY Yan, ... Molecular cell 48 (2), 195-206, 2012 | 314 | 2012 |
RNAcontext: a new method for learning the sequence and structure binding preferences of RNA-binding proteins H Kazan, D Ray, ET Chan, TR Hughes, Q Morris PLoS computational biology 6 (7), e1000832, 2010 | 260 | 2010 |
A translational repression complex in developing mammalian neural stem cells that regulates neuronal specification SK Zahr, G Yang, H Kazan, MJ Borrett, SA Yuzwa, A Voronova, ... Neuron 97 (3), 520-537. e6, 2018 | 147 | 2018 |
Finding the target sites of RNA‐binding proteins X Li, H Kazan, HD Lipshitz, QD Morris Wiley Interdisciplinary Reviews: RNA 5 (1), 111-130, 2014 | 132 | 2014 |
Chemogenomics and orthology‐based design of antibiotic combination therapies S Chandrasekaran, M Cokol‐Cakmak, N Sahin, K Yilancioglu, H Kazan, ... Molecular systems biology 12 (5), 872, 2016 | 110 | 2016 |
Quaking promotes monocyte differentiation into pro-atherogenic macrophages by controlling pre-mRNA splicing and gene expression RG De Bruin, L Shiue, J Prins, HC De Boer, A Singh, WS Fagg, ... Nature communications 7 (1), 10846, 2016 | 104 | 2016 |
MITF-MIR211 axis is a novel autophagy amplifier system during cellular stress DG Ozturk, M Kocak, A Akcay, K Kinoglu, E Kara, Y Buyuk, H Kazan, ... Autophagy 15 (3), 375-390, 2019 | 45 | 2019 |
Modeling the combined effect of RNA-binding proteins and microRNAs in post-transcriptional regulation HK Saber HafezQorani, Atefeh Lafzi, Ruben G. de Bruin, Anton Jan van ... Nucleic Acids Research, 2016 | 39* | 2016 |
Target-independent prediction of drug synergies using only drug lipophilicity K Yilancioglu, ZB Weinstein, C Meydan, A Akhmetov, I Toprak, A Durmaz, ... Journal of chemical information and modeling 54 (8), 2286-2293, 2014 | 39 | 2014 |
MEXCOWalk: Mutual Exclusion and Coverage Based Random Walk to Identify Cancer Modules R Ahmed, C Baali, I, Erten, E Hoxha, H Kazan Bioinformatics, 2019 | 30 | 2019 |
RBPmotif: a web server for the discovery of sequence and structure preferences of RNA-binding proteins H Kazan, Q Morris Nucleic acids research 41 (W1), W180-W186, 2013 | 30 | 2013 |
miR-223 Exerts Translational Control of Proatherogenic Genes in Macrophages MA Nguyen, HD Hoang, A Rasheed, AC Duchez, H Wyatt, M Lynn Cottee, ... Circulation Research, 10.1161/CIRCRESAHA. 121.319120, 2022 | 27 | 2022 |
Community assessment of the predictability of cancer protein and phosphoprotein levels from genomics and transcriptomics M Yang, F Petralia, Z Li, H Li, W Ma, X Song, S Kim, H Lee, H Yu, B Lee, ... Cell systems 11 (2), 186-195. e9, 2020 | 26 | 2020 |
A comprehensive database of high-throughput sequencing-based RNA secondary structure probing data (Structure Surfer) N Berkowitz, I Silverman, D Childress, H Kazan, LS Wang, B Gregory BMC Bioinformatics, 2016 | 21 | 2016 |
RBPSponge: genome-wide identification of lncRNAs that sponge RBPs S HafezQorani, A Houdjedj, M Arici, A Said, H Kazan Bioinformatics, https://doi.org/10.1093/bioinformatics/, 2019 | 14 | 2019 |
JBASE: Joint Bayesian Analysis of Subphenotypes and Epistasis. R Colak, TH Kim, H Kazan, Y Oh, M Cruz, A Valladares-Salgado, ... Bioinformatics, 2015 | 14 | 2015 |
Predicting clinical outcomes in neuroblastoma with genomic data integration I Baali, DAE Acar, TW Aderinwale, S HafezQorani, H Kazan Biology Direct 13, 1-14, 2018 | 12 | 2018 |