Sheng Wang

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Jinbo XuProfessor, Toyota Technological Institute at ChicagoVerified email at ttic.edu
Jianzhu MaPeking UniversityVerified email at pku.edu.cn
Jian PengUniversity of Illinois at Urbana-ChampaignVerified email at illinois.edu
Xin GaoAssociate Professor, Computer Electrical and Mathematical Sciences and Engineering Division, KAUSTVerified email at kaust.edu.sa
Zhen LiChinese University of Hong Kong, Shenzhen (CUHKSZ)Verified email at cuhk.edu.cn
Yu LiAssistant Professor, Computer Science & Engineering, Chinese University of Hong KongVerified email at cse.cuhk.edu.hk
Zhiyong WangToyota Technological Institute at ChicagoVerified email at ttic.edu
Siqi SunResearcher, MicrosoftVerified email at microsoft.com
Morten KallbergIllumina incVerified email at illumina.com
Bingqing XiePost doctoral scholar, University of ChicagoVerified email at medicine.bsd.uchicago.edu
Natalia MaltsevResearch Professor, Department of Human Genetics, The University of ChicagoVerified email at uchicago.edu
Renyu ZhangThe University of ChicagoVerified email at uchicago.edu
Renmin Han (韩仁敏)King Abdullah University of Science and TechnologyVerified email at kaust.edu.sa
Dinanath SulakheUniversity of Chicago, Argonne National LaboratoryVerified email at uchicago.edu
T. Conrad GilliamProfessor of Genetics University of ChicagoVerified email at bsd.uchicago.edu
Yizhou YuBerkeley---UofI, Urbana-Champaign---HKU, IEEE FellowVerified email at acm.org
Mo LiKing Abdullah University of Science and Technology (KAUST)Verified email at kaust.edu.sa
Tobin SosnickProfessor of Biochemistry and Molecular Biology, University of ChicagoVerified email at uchicago.edu
Hong ZengAssociate Professor, Hangzhou Dianzi UniversityVerified email at hdu.edu.cn
Shuguang CuiChair Professor, School of Science and Engineering, CUHKSZVerified email at cuhk.edu.cn

Sheng Wang

unemployment

Verified email at ttic.edu

Computational Biology Protein Structure Prediction Nanopore Sequencing


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Template-based protein structure modeling using the RaptorX web server M Källberg, H Wang, S Wang, J Peng, Z Wang, H Lu, J Xu Nature protocols 7 (8), 1511-1522, 2012	1334	2012
Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model S Wang, S Sun, Z Li, R Zhang, J Xu PLOS Computational Biology 13 (1), e1005324, 2017	516	2017
Protein secondary structure prediction using deep convolutional neural fields S Wang, J Peng, J Ma, J Xu Scientific reports 6, 18962, 2016	412	2016
RaptorX-Property: a web server for protein structure property prediction S Wang, W Li, S Liu, J Xu Nucleic acids research 44 (W1), W430-W435, 2016	280	2016
RaptorX server: a resource for template-based protein structure modeling M Källberg, G Margaryan, S Wang, J Ma, J Xu Protein Structure Prediction, 17-27, 2014	185	2014
Protein structure alignment beyond spatial proximity S Wang, J Ma, J Peng, J Xu Scientific reports 3, 1448, 2013	138	2013
Protein threading using context-specific alignment potential J Ma, S Wang, F Zhao, J Xu Bioinformatics 29 (13), i257-i265, 2013	137	2013
DEEPre: sequence-based enzyme EC number prediction by deep learning Y Li, S Wang, R Umarov, B Xie, M Fan, L Li, X Gao Bioinformatics, btx680, 2017	125	2017
Protein contact prediction by integrating joint evolutionary coupling analysis and supervised learning J Ma, S Wang, Z Wang, J Xu Bioinformatics, btv472, 2015	88	2015
Chiron: Translating nanopore raw signal directly into nucleotide sequence using deep learning H Teng, MD Cao, MB Hall, T Duarte, S Wang, LJM Coin GigaScience 7 (5), giy037, 2018	82	2018
A conditional neural fields model for protein threading J Ma, J Peng, S Wang, J Xu Bioinformatics 28 (12), i59-i66, 2012	73	2012
Analysis of deep learning methods for blind protein contact prediction in CASP12 S Wang, S Sun, J Xu Proteins: Structure, Function, and Bioinformatics 86 (S1), 67-77, 2018	69	2018
Analysis of distance‐based protein structure prediction by deep learning in CASP13 J Xu, S Wang Proteins: Structure, Function, and Bioinformatics 87 (12), 1069-1081, 2019	59	2019
AUCpreD: proteome-level protein disorder prediction by AUC-maximized deep convolutional neural fields S Wang, J Ma, J Xu Bioinformatics 32 (17), i672-i679, 2016	56	2016
MRFalign: protein homology detection through alignment of Markov random fields J Ma, S Wang, Z Wang, J Xu PLoS computational biology 10 (3), e1003500, 2014	56	2014
PointASNL: Robust Point Clouds Processing using Nonlocal Neural Networks with Adaptive Sampling X Yan, C Zheng, Z Li, S Wang, S Cui Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern …, 2020	55	2020
ComplexContact: a web server for inter-protein contact prediction using deep learning H Zeng, S Wang, T Zhou, F Zhao, X Li, Q Wu, J Xu Nucleic acids research 46 (W1), W432-W437, 2018	53	2018
DeepSimulator: a deep simulator for Nanopore sequencing Y Li, R Han, C Bi, M Li, S Wang, X Gao Bioinformatics 34 (17), 2899-2908, 2018	52	2018
Folding membrane proteins by deep transfer learning S Wang, Z Li, Y Yu, J Xu Cell Systems 5 (3), 202-211. e3, 2017	52	2017
DeepCNF-D: Predicting Protein Order/Disorder Regions by Weighted Deep Convolutional Neural Fields S Wang, S Weng, J Ma, Q Tang International journal of molecular sciences 16 (8), 17315-17330, 2015	52	2015

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