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Anton Bankevich
Anton Bankevich
UCSD
Подтвержден адрес электронной почты в домене eng.ucsd.edu - Главная страница
Название
Процитировано
Процитировано
Год
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing
A Bankevich, S Nurk, D Antipov, AA Gurevich, M Dvorkin, AS Kulikov, ...
Journal of computational biology 19 (5), 455-477, 2012
154962012
Assembling single-cell genomes and mini-metagenomes from chimeric MDA products
S Nurk, A Bankevich, D Antipov, AA Gurevich, A Korobeynikov, A Lapidus, ...
Journal of Computational Biology 20 (10), 714-737, 2013
1518*2013
ExSPAnder: a universal repeat resolver for DNA fragment assembly
AD Prjibelski, I Vasilinetc, A Bankevich, A Gurevich, T Krivosheeva, ...
Bioinformatics 30 (12), i293-i301, 2014
952014
dipSPAdes: assembler for highly polymorphic diploid genomes
Y Safonova, A Bankevich, PA Pevzner
Journal of Computational Biology 22 (6), 528-545, 2015
882015
Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly
S Kim, YS Cho, HM Kim, O Chung, H Kim, S Jho, H Seomun, J Kim, ...
Genome biology 17 (1), 1-12, 2016
732016
TruSPAdes: barcode assembly of TruSeq synthetic long reads
A Bankevich, PA Pevzner
Nature methods 13 (3), 248-250, 2016
462016
Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads
JG Sanders, S Nurk, RA Salido, J Minich, ZZ Xu, Q Zhu, C Martino, ...
Genome biology 20 (1), 1-14, 2019
362019
cloudSPAdes: assembly of synthetic long reads using de Bruijn graphs
I Tolstoganov, A Bankevich, Z Chen, PA Pevzner
Bioinformatics 35 (14), i61-i70, 2019
122019
Bounds of the number of leaves of spanning trees
AV Bankevich, DV Karpov
Journal of Mathematical Sciences 184 (5), 564-572, 2012
122012
Joint analysis of long and short reads enables accurate estimates of microbiome complexity
A Bankevich, PA Pevzner
Cell systems 7 (2), 192-200. e3, 2018
10*2018
mosaicFlye: Resolving long mosaic repeats using long error-prone reads
A Bankevich, P Pevzner
BioRxiv, 2020
6*2020
Multiplex de Bruijn graphs enable genome assembly from long, high-fidelity reads
A Bankevich, AV Bzikadze, M Kolmogorov, D Antipov, PA Pevzner
Nature biotechnology, 1-7, 2022
5*2022
Bounds of the number of leaves of spanning trees in graphs without triangles
AV Bankevich
Journal of Mathematical Sciences 184 (5), 557-563, 2012
52012
ORFograph: search for novel insecticidal protein genes in genomic and metagenomic assembly graphs
T Dvorkina, A Bankevich, A Sorokin, F Yang, B Adu-Oppong, R Williams, ...
Microbiome 9 (1), 1-14, 2021
22021
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Статьи 1–14