Alexander Goncearenco
Alexander Goncearenco
Подтвержден адрес электронной почты в домене
A dominant negative heterozygous G87R mutation in the zinc transporter, ZnT-2 (SLC30A2), results in transient neonatal zinc deficiency
I Lasry, YA Seo, H Ityel, N Shalva, B Pode-Shakked, F Glaser, B Berman, ...
Journal of Biological Chemistry 287 (35), 29348-29361, 2012
SPACER: server for predicting allosteric communication and effects of regulation
A Goncearenco, S Mitternacht, T Yong, B Eisenhaber, F Eisenhaber, ...
Nucleic acids research 41 (W1), W266-W272, 2013
Coupling between histone conformations and DNA geometry in nucleosomes on a microsecond timescale: atomistic insights into nucleosome functions
AK Shaytan, GA Armeev, A Goncearenco, VB Zhurkin, D Landsman, ...
Journal of molecular biology 428 (1), 221-237, 2016
MutaBind estimates and interprets the effects of sequence variants on protein–protein interactions
M Li, FL Simonetti, A Goncearenco, AR Panchenko
Nucleic acids research 44 (W1), W494-W501, 2016
Thermophilic adaptation of protein complexes inferred from proteomic homology modeling
BG Ma, A Goncearenco, IN Berezovsky
Structure 18 (7), 819-828, 2010
Exploring background mutational processes to decipher cancer genetic heterogeneity
A Goncearenco, SL Rager, M Li, QX Sang, IB Rogozin, AR Panchenko
Nucleic acids research 45 (W1), W514-W522, 2017
Protein function from its emergence to diversity in contemporary proteins
A Goncearenco, IN Berezovsky
Physical biology 12 (4), 045002, 2015
Prototypes of elementary functional loops unravel evolutionary connections between protein functions
A Goncearenco, IN Berezovsky
Bioinformatics 26 (18), i497-i503, 2010
Mutational signatures and mutable motifs in cancer genomes
IB Rogozin, YI Pavlov, A Goncearenco, S De, AG Lada, E Poliakov, ...
Briefings in bioinformatics 19 (6), 1085-1101, 2018
Activation induced deaminase mutational signature overlaps with CpG methylation sites in follicular lymphoma and other cancers
IB Rogozin, AG Lada, A Goncearenco, MR Green, S De, G Nudelman, ...
Scientific reports 6, 38133, 2016
Nucleotide binding database NBDB–a collection of sequence motifs with specific protein-ligand interactions
Z Zheng, A Goncearenco, IN Berezovsky
Nucleic acids research 44 (D1), D301-D307, 2016
Molecular mechanisms of adaptation emerging from the physics and evolution of nucleic acids and proteins
A Goncearenco, BG Ma, IN Berezovsky
Nucleic acids research 42 (5), 2879-2892, 2014
Simple yet functional phosphate-loop proteins
MLR Romero, F Yang, YR Lin, A Toth-Petroczy, IN Berezovsky, ...
Proceedings of the National Academy of Sciences 115 (51), E11943-E11950, 2018
DNA polymerase η mutational signatures are found in a variety of different types of cancer
IB Rogozin, A Goncearenco, AG Lada, S De, V Yurchenko, G Nudelman, ...
Cell Cycle 17 (3), 348-355, 2018
Exploring protein-protein interactions as drug targets for anti-cancer therapy with in silico workflows
A Goncearenco, M Li, FL Simonetti, BA Shoemaker, AR Panchenko
Proteomics for Drug Discovery, 221-236, 2017
Annotating mutational effects on proteins and protein interactions: designing novel and revisiting existing protocols
M Li, A Goncearenco, AR Panchenko
Proteomics, 235-260, 2017
The fundamental tradeoff in genomes and proteomes of prokaryotes established by the genetic code, codon entropy, and physics of nucleic acids and proteins
A Goncearenco, IN Berezovsky
Biology direct 9 (1), 29, 2014
Computational reconstruction of primordial prototypes of elementary functional loops in modern proteins
A Goncearenco, IN Berezovsky
Bioinformatics 27 (17), 2368-2375, 2011
Computational approaches to prioritize cancer driver missense mutations
F Zhao, L Zheng, A Goncearenco, AR Panchenko, M Li
International journal of molecular sciences 19 (7), 2113, 2018
Structural perspectives on the evolutionary expansion of unique protein-protein binding sites
A Goncearenco, AK Shaytan, BA Shoemaker, AR Panchenko
Biophysical journal 109 (6), 1295-1306, 2015
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Статьи 1–20