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Valeri Barsegov
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Dynamics of unbinding of cell adhesion molecules: transition from catch to slip bonds
V Barsegov, D Thirumalai
Proceedings of the National Academy of Sciences 102 (6), 1835-1839, 2005
1872005
Mechanism of fibrin (ogen) forced unfolding
A Zhmurov, AEX Brown, RI Litvinov, RI Dima, JW Weisel, V Barsegov
Structure 19 (11), 1615-1624, 2011
1392011
Mechanical transition from α-helical coiled coils to β-sheets in fibrin (ogen)
A Zhmurov, O Kononova, RI Litvinov, RI Dima, V Barsegov, JW Weisel
Journal of the American Chemical Society 134 (50), 20396-20402, 2012
1022012
Tubulin Bond Energies and Microtubule Biomechanics Determined from Nanoindentation in Silico
O Kononova, Y Kholodov, KE Theisen, KA Marx, RI Dima, ...
Journal of the American Chemical Society 136 (49), 17036-17045, 2014
832014
Sop‐GPU: Accelerating biomolecular simulations in the centisecond timescale using graphics processors
A Zhmurov, RI Dima, Y Kholodov, V Barsegov
Proteins: Structure, Function, and Bioinformatics 78 (14), 2984-2999, 2010
782010
Dissociation of bimolecular αIIbβ3-fibrinogen complex under a constant tensile force
RI Litvinov, V Barsegov, AJ Schissler, AR Fisher, JS Bennett, JW Weisel, ...
Biophysical journal 100 (1), 165-173, 2011
762011
Assembly and mechanical properties of the cargo-free and cargo-loaded bacterial nanocompartment encapsulin
J Snijder, O Kononova, IM Barbu, C Uetrecht, WF Rurup, RJ Burnley, ...
Biomacromolecules 17 (8), 2522-2529, 2016
632016
Multitime correlation functions for single molecule kinetics with fluctuating bottlenecks
V Barsegov, V Chernyak, S Mukamel
The Journal of chemical physics 116 (10), 4240-4251, 2002
592002
Resolving two-dimensional kinetics of the integrin αIIbβ3-fibrinogen interactions using binding-unbinding correlation spectroscopy
RI Litvinov, A Mekler, H Shuman, JS Bennett, V Barsegov, JW Weisel
Journal of Biological Chemistry 287 (42), 35275-35285, 2012
532012
Structural transitions and energy landscape for cowpea chlorotic mottle virus capsid mechanics from nanomanipulation in vitro and in silico
O Kononova, J Snijder, M Brasch, J Cornelissen, RI Dima, KA Marx, ...
Biophysical journal 105 (8), 1893-1903, 2013
502013
Probing single molecule kinetics by photon arrival trajectories
V Barsegov, S Mukamel
The Journal of chemical physics 116 (22), 9802-9810, 2002
402002
Generation of Random Numbers on Graphics Processors: Forced Indentation In Silico of the Bacteriophage HK97
A Zhmurov, K Rybnikov, Y Kholodov, V Barsegov
The Journal of Physical Chemistry B 115 (18), 5278-5288, 2011
382011
Structural basis of interfacial flexibility in fibrin oligomers
A Zhmurov, AD Protopopova, RI Litvinov, P Zhukov, AR Mukhitov, ...
Structure 24 (11), 1907-1917, 2016
352016
Quantum decoherence, Zeno process, and time symmetry breaking
T Petrosky, V Barsegov
Physical Review E 65 (4), 046102, 2002
342002
Conformational flexibility and self-association of fibrinogen in concentrated solutions
YF Zuev, RI Litvinov, AE Sitnitsky, BZ Idiyatullin, DR Bakirova, ...
The Journal of Physical Chemistry B 121 (33), 7833-7843, 2017
332017
Molecular mechanisms, thermodynamics, and dissociation kinetics of knob-hole interactions in fibrin
O Kononova, RI Litvinov, A Zhmurov, A Alekseenko, CH Cheng, ...
Journal of Biological Chemistry 288 (31), 22681-22692, 2013
332013
Mapping the energy landscape of biomolecules using single molecule force correlation spectroscopy: theory and applications
V Barsegov, DK Klimov, D Thirumalai
Biophysical journal 90 (11), 3827-3841, 2006
322006
Dynamic competition between catch and slip bonds in selectins bound to ligands
V Barsegov, D Thirumalai
The Journal of Physical Chemistry B 110 (51), 26403-26412, 2006
302006
Atomic structural models of fibrin oligomers
A Zhmurov, AD Protopopova, RI Litvinov, P Zhukov, JW Weisel, ...
Structure 26 (6), 857-868. e4, 2018
292018
Probing protein-protein interactions by dynamic force correlation spectroscopy
V Barsegov, D Thirumalai
Physical review letters 95 (16), 168302, 2005
282005
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