Tim Harder
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Beyond rotamers: a generative, probabilistic model of side chains in proteins
T Harder, W Boomsma, M Paluszewski, J Frellsen, K Johansson, ...
BMC bioinformatics 11 (1), 306, 2010
Using an alignment of fragment strings for comparing protein structures
I Friedberg, T Harder, R Kolodny, E Sitbon, Z Li, A Godzik
Bioinformatics 23 (2), e219-e224, 2007
JAFA: a protein function annotation meta-server
I Friedberg, T Harder, A Godzik
Nucleic acids research 34 (suppl 2), W379-W381, 2006
PHAISTOS: A framework for Markov chain Monte Carlo simulation and inference of protein structure
W Boomsma, J Frellsen, T Harder, S Bottaro, KE Johansson, P Tian, ...
Journal of Computational Chemistry, 2013
Fast large-scale clustering of protein structures using Gauss integrals
T Harder, M Borg, W Boomsma, P Røgen, T Hamelryck
Bioinformatics 28 (4), 510-515, 2012
Generative probabilistic models extend the scope of inferential structure determination
S Olsson, W Boomsma, J Frellsen, S Bottaro, T Harder, J Ferkinghoff-Borg, ...
Journal of Magnetic Resonance 213 (1), 182-186, 2011
Unilateral Access Regulation: Ground State Dynamics of the Pseudomonas aeruginosa Outer Membrane Efflux Duct OprM
DC Koch, M Raunest, T Harder, C Kandt
Biochemistry 52 (1), 178-187, 2012
An efficient null model for conformational fluctuations in proteins
T Harder, M Borg, S Bottaro, W Boomsma, S Olsson, J Ferkinghoff-Borg, ...
Structure 20 (6), 1028-1039, 2012
A probabilistic approach to protein structure prediction: PHAISTOS in CASP9
M Borg, K Mardia, W Boomsma, J Frellsen, T Harder, K Stovgaard, ...
LASR2009-Statistical tools for challenges in bioinformatics, 65-70, 2009
The Internet as Scientific Knowledge Base: Navigating the Chem‐Bio Space
K Stierand, T Harder, T Marek, M Hilbig, C Lemmen, M Rarey
Molecular Informatics 31 (8), 543-546, 2012
Exploring the Conformational Space of Proteins Using Probabilistic Models: A Dissertation Submitted to the University of Copenhagen
T Harder
Faculty of Science, University of Copenhagen, 2011
BASILISK-a generative model of side chains in proteins
T Harder, J Frellsen, T Hamelryck
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Articles 1–12